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Series GSE74908 Query DataSets for GSE74908
Status Public on Jan 10, 2016
Title Functional dissection of Drosophila melanogasterSUUR protein influence on H3K27me3 profile
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary In eukaryotes, heterochromatin replicates late in S phase of the cell cycle and contains specific covalent modifications of histones. SuURmutation found in Drosophila makes heterochromatin replicate earlier than in wild type and reduces the level of repressive histone modifications. SUUR protein was shown to be associated with moving replication forks, apparently through the interaction with PCNA. The biological process underlying the effects of SUUR on replication and composition of heterochromatin remains unknown.
 
Overall design Examination of H3K27me3 histone modification in Drosophila embryos in presence or absence of SuUR mutation.
 
Contributor(s) Posukh OV, Belyakin SN, Laktionov PP, Maksimov DA, Koryakov DE
Citation(s) 29191233
Submission date Nov 11, 2015
Last update date Oct 29, 2019
Contact name Daniil Maksimov
E-mail(s) vift@mail.ru
Organization name MCB NSC RAS
Lab Genomics lab
Street address Lavrentjeva ave., 8/2
City Novosibirsk
ZIP/Postal code 630090
Country Russia
 
Platforms (1)
GPL16479 Illumina MiSeq (Drosophila melanogaster)
Samples (20)
GSM1937240 SuUR embr AB+ 3
GSM1937241 SuUR embr input 3
GSM1937242 yw embr AB+ 3
This SubSeries is part of SuperSeries:
GSE74909 Repressive Histone Marks Renewal Impedes Replication Fork Progression and Contributes To Late Replication in Drosophila
Relations
BioProject PRJNA301886
SRA SRP066050

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE74908_SUUR_AB_div_input_profile_in_10000bp_bins_1000bp_shift.wig.gz 887.0 Kb (ftp)(http) WIG
GSE74908_SUUR_me2_div_input_profile_in_50000bp_bins_5000bp_shift_QN.txt.gz 171.8 Kb (ftp)(http) TXT
GSE74908_SUUR_me3_div_input_profile_in_50000bp_bins_5000bp_shift_QN.txt.gz 173.7 Kb (ftp)(http) TXT
GSE74908_ywAB_div_input_profile_in_10000bp_bins_1000bp_shift.wig.gz 896.4 Kb (ftp)(http) WIG
GSE74908_yw_me2_div_input_profile_in_50000bp_bins_5000bp_shift_QN.txt.gz 172.9 Kb (ftp)(http) TXT
GSE74908_yw_me3_div_input_profile_in_50000bp_bins_5000bp_shift_QN.txt.gz 174.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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