|
| Status |
Public on Jun 01, 2016 |
| Title |
Generation of Patient-Matched Malignant and Normal Primary Cell Cultures from Clear Cell Renal Cell Carcinoma Patients |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Transcriptome profiling of de novo-derived ccRCC cell cultures and their matching parental tumours. VHL-mutant and VHL wild-type cultures were established by isolating CA9+ and CA9- cells from tumor samples using FACS.
|
| |
|
| Overall design |
RNASeq expression profiling of 18 renal cell carcinoma samples, including 6 patient tumours, 6 VHL mutant and 6 VHL WT derivative cell cultures
|
| |
|
| Contributor(s) |
Brown KR, Ailles L |
| Citation(s) |
27422173 |
| |
| Submission date |
Nov 12, 2015 |
| Last update date |
Jul 14, 2022 |
| Contact name |
Laurie Ailles |
| E-mail(s) |
lailles@uhnresearch.ca
|
| Phone |
416-581-7868
|
| Organization name |
University Health Network
|
| Department |
Princess Margaret Cancer Centre
|
| Lab |
Ailles Lab
|
| Street address |
101 College St.
|
| City |
Toronto |
| State/province |
ON |
| ZIP/Postal code |
M5G 1L7` |
| Country |
Canada |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (18)
|
|
| Relations |
| BioProject |
PRJNA302010 |
| SRA |
SRP066118 |
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