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Series GSE75160 Query DataSets for GSE75160
Status Public on Oct 18, 2016
Title Whole RNA sequencing to identify targets of ets-4 that are responsible for rege-1 (C30F12.1) phenotype
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Summary Ets-4 was previously identified as a suppressor of rege-1(rrr13) phenotype. The goal of this experiment was to identify down-stream regulators of ETS-4, which facilitate this suppression.
 
Overall design mRNA profiling of C.elegans young adults of ets-4 knockdown or mock RNAi control in the background of rege-1(rrr13)
 
Contributor(s) Gaidatzis D, Habacher C
Citation(s) 27746047
Submission date Nov 18, 2015
Last update date May 15, 2019
Contact name Dimos Gaidatzis
E-mail(s) d.gaidatzis@fmi.ch
Organization name Friedrich Miescher Institute
Street address Maulbeerstrasse 66
City Basel
ZIP/Postal code 4058
Country Switzerland
 
Platforms (1)
GPL18245 Illumina HiSeq 2500 (Caenorhabditis elegans)
Samples (4)
GSM1944388 rrr13_mock_1
GSM1944389 rrr13_mock_2
GSM1944390 rrr13_ets4RNAi_1
This SubSeries is part of SuperSeries:
GSE75163 Whole RNA sequencing to identify targets of ETS-4 and REGE-1
Relations
BioProject PRJNA302661
SRA SRP066376

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE75160_ce_mRNA_ets4RNAi_normalized.txt.gz 473.0 Kb (ftp)(http) TXT
GSE75160_ce_mRNA_ets4RNAi_rawCounts.txt.gz 219.6 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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