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Series GSE75649 Query DataSets for GSE75649
Status Public on Dec 04, 2015
Title The ancestral gene repertoire of animal stem cells
Organism Ephydatia fluviatilis
Experiment type Expression profiling by high throughput sequencing
Summary This work reveals the deeply conserved gene repertoire of animal stem cells, from sponges to mammals.
 
Overall design mRNA profiles totipotent stem cells (archeocytes), choanocytes, other differentiated cell types in a freshwater sponge and were mapped on the reference transcriptome generated in the same study
 
Contributor(s) AliƩ A, Funayama N
Citation(s) 26644562
BioProject PRJNA244851
Submission date Dec 03, 2015
Last update date May 15, 2019
Contact name Noriko Funayama
Organization name Kyoto University
Department Biophysics
Lab Molecular Developmental Biology
Street address Kitashirakawa-Oiwake, Sakyo-ku
City Kyoto
State/province Kyoto
ZIP/Postal code 606-8502
Country Japan
 
Platforms (1)
GPL21202 Illumina HiSeq 2000 (Ephydatia fluviatilis)
Samples (7)
GSM1961240 Archeocyte 1
GSM1961241 Archeocyte 2
GSM1961242 Choanocyte 1

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE75649_Alie_PNAS_rpkm.xls.gz 2.2 Mb (ftp)(http) XLS
GSE75649_Alie_PNAS_transcripts.txt.gz 6.6 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data provided as supplementary file
Processed data are available on Series record

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