|
| Status |
Public on Jan 01, 2016 |
| Title |
Genome-wide mapping of immature erythrocyte transcribed chromosomal domains (F1-seq) |
| Organism |
Gallus gallus |
| Experiment type |
Other
|
| Summary |
Transcriptional regulation is impacted by multiple layers of genome organization. Here, we identified and mapped out all the transcriptionally active chromosomal domains in the chicken immature erythrocyte genome, including the known β- and α-globin domains, by combining a powerful chromatin fractionation method with next generation DNA and RNA sequencing.
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| |
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| Overall design |
To characterize transcriptionally active chromatin domains, we used two biological replicates. Each replicate set has one control SE fraction and one transcriptionally active chromatin fraction (F1)
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| Contributor(s) |
Jahan S, xu W, He S, Gonzalez C, Delcuve GP, Davie JR |
| Citation(s) |
27226810 |
| |
| Submission date |
Dec 09, 2015 |
| Last update date |
Jan 16, 2023 |
| Contact name |
James Ronald Davie |
| E-mail(s) |
jim.davie@umanitoba.ca
|
| Phone |
2042723174
|
| Organization name |
University of Manitoba
|
| Department |
Biochemistry and Medical Genetics
|
| Street address |
745 Bannatyne Avenue, RM 333A
|
| City |
Winnipeg |
| State/province |
Manitoba |
| ZIP/Postal code |
R3E 0J9 |
| Country |
Canada |
| |
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| Platforms (1) |
| GPL21224 |
AB 5500xl Genetic Analyzer (Gallus gallus) |
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| Samples (5)
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| This SubSeries is part of SuperSeries: |
| GSE75955 |
The chicken erythrocyte epigenome |
|
| Relations |
| BioProject |
PRJNA305528 |
| SRA |
SRP067180 |
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