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| Status |
Public on Dec 25, 2015 |
| Title |
Expression data from tomato (Solanum lycopersicum) plants in interaction with different Trichoderma strains |
| Organism |
Solanum lycopersicum |
| Experiment type |
Expression profiling by array
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| Summary |
Trichoderma harzianum T34 is a fungal strain able to promote the plant growth and to increase plant defense responses. Trichoderma harzianum transformants expressing the amdS gene, encoding an acetamidase, of Aspergillus nidulans produce a higher plant development than the wild type T34.
We used microarrays to analyze the physiological and biochemical changes in tomato plants produced as consequence of interaction with Trichoderma harzianum T34 and amdS transformants
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| Overall design |
Aerial parts of tomato plants in interaction with different Trichoderma strains were selected for RNA extraction and hybridization on Affimetrix microarrays
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| Contributor(s) |
Rubio MB, Dominguez S |
| Citation(s) |
27536277 |
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| Submission date |
Dec 24, 2015 |
| Last update date |
Jun 27, 2019 |
| Contact name |
Enrique Monte |
| E-mail(s) |
emv@usal.es
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| Phone |
34923294500 (5119)
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| Organization name |
University of Salamanca
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| Department |
Spanish-Portuguese Centre for Agricultural Research
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| Lab |
2
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| Street address |
Rio Duero
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| City |
Salamanca |
| State/province |
Salamanca |
| ZIP/Postal code |
37185 |
| Country |
Spain |
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| Platforms (1) |
| GPL4741 |
[Tomato] Affymetrix Tomato Genome Array |
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| Samples (12)
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| GSM1981375 |
tomato control plants, biological rep1 |
| GSM1981376 |
tomato-Trichoderma harzianum T34 interaction, biological rep 1 |
| GSM1981377 |
tomato-Trichoderma harzianum amds6 interaction, biological rep 1 |
| GSM1981378 |
tomato-Trichoderma harzianum amds122 interaction, biological rep 1 |
| GSM1981379 |
tomato control plants, biological rep2 |
| GSM1981380 |
tomato-Trichoderma harzianum T34 interaction, biological rep 2 |
| GSM1981381 |
tomato-Trichoderma harzianum amds6 interaction, biological rep 2 |
| GSM1981382 |
tomato-Trichoderma harzianum amds122 interaction, biological rep 2 |
| GSM1981383 |
tomato control plants, biological rep3 |
| GSM1981384 |
tomato-Trichoderma harzianum T34 interaction, biological rep 3 |
| GSM1981385 |
tomato-Trichoderma harzianum amds6 interaction, biological rep 3 |
| GSM1981386 |
tomato-Trichoderma harzianum amds122 interaction, biological rep 3 |
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| Relations |
| BioProject |
PRJNA306921 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE76332_RAW.tar |
12.1 Mb |
(http)(custom) |
TAR (of CEL, CHP) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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