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Status |
Public on Oct 14, 2016 |
Title |
MBNL1 HITS-CLIP in MDA-MB-231 breast cancer cells |
Organism |
Homo sapiens |
Experiment type |
Other
|
Summary |
HITS-CLIP was performed to identify endogenous MBNL1 binding sites on RNAs in MDA-MB-231 breast cancer cells.
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Overall design |
A previously published method was used to perform HITS-CLIP for endogenous MBNL1 in MDA-MB-231 breast cancer cells (Moore et al. 2014. Nat Protoc. 9:263-293.)
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Contributor(s) |
Fish L, Pencheva N, Goodarzi H, Tran H, Yoshida M, Tavazoie SF |
Citation(s) |
26883358 |
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Submission date |
Jan 04, 2016 |
Last update date |
May 15, 2019 |
Contact name |
Hani Goodarzi |
Organization name |
UCSF
|
Department |
Biochemistry and Biophysics
|
Street address |
600 16th St, GH S312D
|
City |
San Francisco |
State/province |
CA |
ZIP/Postal code |
94158 |
Country |
USA |
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Platforms (1) |
GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
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Samples (2) |
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This SubSeries is part of SuperSeries: |
GSE76488 |
Muscleblind-like 1 suppresses breast cancer metastatic colonization and stabilizes metastasis suppressor transcripts |
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Relations |
BioProject |
PRJNA307558 |
SRA |
SRP068015 |