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Series GSE77216 Query DataSets for GSE77216
Status Public on Oct 09, 2018
Title Manganese (II) Activates cGAS-STING pathway
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We show that Manganese (II) is a potent type I-IFN inducing agonist, stimulating cells into an anti-viral state in the absence of infection. Mechanically, Mn2+ treatment led to a profound cGAS-STING-dependent innate immune activation, conferring cells or mice viral resistance.
 
Overall design THP1 cells were treated with Mn2+, VACV, IFNβ or empty media (control). RNA was extracted and sequenced.
 
Contributor(s) Jiang Z, Guan Y
Citation(s) 29653696
Submission date Jan 26, 2016
Last update date May 15, 2019
Contact name Yukun Guan
E-mail(s) yukun.guan@nih.gov
Organization name NIAAA
Lab LLD
Street address 5625 Fishers Lane, Room 2S-30
City Rockville
State/province MD
ZIP/Postal code 20852
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (4)
GSM2046117 Control
GSM2046118 Mn
GSM2046119 VACV
Relations
BioProject PRJNA309759
SRA SRP068909

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77216_RAW.tar 1.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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