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| Status |
Public on Oct 24, 2016 |
| Title |
Gene expression analysis in mouse podocytes expressing shRNA directed against the long noncoding RNA Tug1 |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
|
| Summary |
We generated two mouse podocyte cell lines stably transduced with either a shControl lentiviral construct or a shRNA lentiviral construct designed to target Tug1 RNA to investigate the consequences on the gene expression profile of Tug1 knockdown in differentiated mouse podocytes
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| Overall design |
RNA from 2 biological repliactes of shControl podocytes, 2 biological replicates of independent shTug1 clones (shTug1 Clone 2 and shTug1 Clone 3) were harvested after 10 days of podocyte differentiation and submitted for microarray analysis on the Agilent Mouse 4x44K gene expression arrays.
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| |
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| Contributor(s) |
Danesh FR, Badal SS, Long J |
| Citation(s) |
27760051 |
| |
| Submission date |
Feb 02, 2016 |
| Last update date |
Nov 01, 2017 |
| Contact name |
Shawn Samson Badal |
| Organization name |
MD Anderson Cancer Center
|
| Department |
Nephrology
|
| Lab |
Danesh
|
| Street address |
2121 W. Holcombe Blvd
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77030 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL11202 |
Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA310647 |
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