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Series GSE77507 Query DataSets for GSE77507
Status Public on Feb 04, 2016
Title Differential gene expression following MafG overexpression
Organism Mus musculus
Experiment type Expression profiling by array
Summary Specific bile acids are potent signaling molecules that modulate metabolic pathways affecting lipid, glucose and bile acid homeostasis, and the microbiota. Bile acids are synthesized from cholesterol in the liver, and the key enzymes involved in bile acid synthesis (Cyp7a1, Cyp8b1) are regulated transcriptionally by the nuclear receptor FXR. We have identified an FXR-regulated pathway upstream of a transcriptional repressor that controls multiple bile acid metabolism genes. We identify MafG as an FXR target gene and show that hepatic MAFG overexpression represses genes of the bile acid synthetic pathway and modifies the biliary bile acid composition. In contrast, loss-of-function studies using MafG(+/-) mice causes de-repression of the same genes with concordant changes in biliary bile acid levels. Finally, we identify functional MafG response elements in bile acid metabolism genes using ChIP-seq analysis. Our studies identify a molecular mechanism for the complex feedback regulation of bile acid synthesis controlled by FXR
 
Overall design Wild-type C57BL/6 mice were treated with either Ad-Control (Ad-CMV) or Ad-MafG for 5 days. Livers were then harvested following a 4-6h fast, RNA was isolated and analyzed by Illumina Microarray.
6 samples were analyzed, 3 per condition. Each sample represents one mouse.
 
Contributor(s) de Aguiar Vallim T, Edwards PA
Citation(s) 25651182
Submission date Feb 02, 2016
Last update date Jun 14, 2018
Contact name Thomas A Vallim
E-mail(s) tvallim@mednet.ucla.edu
Organization name UCLA
Street address 650 Charles E. Young Drive South, A2-237 CHS
City Los Angeles
State/province CA
ZIP/Postal code 90095 (MC 167917)
Country USA
 
Platforms (1)
GPL6885 Illumina MouseRef-8 v2.0 expression beadchip
Samples (6)
GSM2053429 Liver control rep1
GSM2053430 Liver control rep2
GSM2053431 Liver control rep3
This SubSeries is part of SuperSeries:
GSE77559 MAFG is a transcriptional repressor of bile acid synthesis and metabolism
Relations
BioProject PRJNA310734

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77507_RAW.tar 3.1 Mb (http)(custom) TAR
GSE77507_averaged_data_matrix.txt.gz 504.2 Kb (ftp)(http) TXT
GSE77507_non-normalized.txt.gz 711.9 Kb (ftp)(http) TXT
Processed data are available on Series record
Processed data included within Sample table

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