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Status |
Public on May 18, 2007 |
Title |
Foxp3-dependent programme of regulatory T-cell differentiation |
Organism |
Mus musculus |
Experiment type |
Expression profiling by array
|
Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Thymocyte RNA (GSE7770) was processed with Affy and Enzo reagents whereas peripheral cell RNA (GSE7280) was processed with Ambion reagents, which amplified the cRNA more robustly. As a result, the two data sets don't normalize very well to each other and shouldn't be compared directly to each other.
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Citation(s) |
17220874 |
|
Submission date |
May 10, 2007 |
Last update date |
Feb 11, 2019 |
Contact name |
Alexander Rudensky |
Organization name |
University of Washington
|
Department |
Immunology
|
Street address |
1959 Pacific St
|
City |
Seattle |
State/province |
WA |
ZIP/Postal code |
98195 |
Country |
USA |
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Platforms (1) |
GPL1261 |
[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array |
|
Samples (14)
|
GSM154499 |
GFP- CD25- CD4+ cells from Foxp3(gfp/gfp) mice |
GSM154500 |
GFP- CD25+ CD4+ cells from Foxp3(gfp/gfp) mice |
GSM154501 |
GFP+ CD4+ cells from Foxp3(gfpko/wt) mice |
GSM154502 |
GFP+ CD4+ cells from Foxp3(gfp/gfp) mice |
GSM154725 |
GFP+ CD4+ cells from Foxp3(gfp/gfp) mice treated with IL-2 |
GSM154726 |
GFP- CD25+ CD4+ cells from Foxp3(gfp/gfp) mice treated with IL-2 |
GSM154727 |
GFP+ CD4+ cells from Foxp3(gfpko/wt) mice treated with IL-2 |
GSM154730 |
GITR+ CD4+ cells from C57BL/6 mice transduced with empty MigR1 vector |
GSM154733 |
GITR+ CD4+ cells from C57BL/6 mice transduced with MigR1-PDE3B |
GSM154735 |
GITR+ CD4+ cells from C57BL/6 mice transduced with MigR1-PDE3B(H801A) |
GSM188246 |
GFP- CD25- CD4+ CD8- thymocytes from Foxp3(gfp/gfp) mice |
GSM188247 |
GFP- CD25+ CD4+ CD8- thymocytes from Foxp3(gfp/gfp) mice |
GSM188248 |
GFP+ CD4+ CD8- thymocytes from Foxp3(gfpko/wt) mice |
GSM188249 |
GFP+ CD4+ CD8- thymocytes from Foxp3(gfp/gfp) mice |
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This SuperSeries is composed of the following SubSeries: |
GSE7280 |
Gene expression in peripheral cells: effects of Foxp3 and PDE3B |
GSE7770 |
Gene expression in thymic CD4 T cells: effects of Foxp3 |
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Relations |
BioProject |
PRJNA99793 |