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Series GSE77781 Query DataSets for GSE77781
Status Public on Apr 11, 2016
Title Protracted NP95 binding to hemimethylated DNA disrupts SETDB1-mediated proviral silencing
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 27151458
Submission date Feb 10, 2016
Last update date May 15, 2019
Contact name Takaho A. Endo
E-mail(s) takaho.endo@riken.jp
Organization name RIKEN
Department IMS
Lab Laboratory for Integrative Genomics
Street address 1-7-22 Suehiro, Tsurumi
City Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
 
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (40)
GSM2059154 DN wt ESC, replicate 1 [RNA-seq]
GSM2059155 DN wt ESC, replicate 2 [RNA-seq]
GSM2059156 DN+Myc-Np95 cDKO ESC [RNA-seq]
This SuperSeries is composed of the following SubSeries:
GSE77778 Protracted NP95 binding to hemimethylated DNA disrupts SETDB1-mediated proviral silencing [RNA-seq]
GSE77779 Protracted NP95 binding to hemimethylated DNA disrupts SETDB1-mediated proviral silencing [ChIP-seq]
GSE77780 Protracted NP95 binding to hemimethylated DNA disrupts SETDB1-mediated proviral silencing [RRBS-seq]
Relations
BioProject PRJNA311541

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77781_RAW.tar 65.6 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp

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