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Series GSE77790 Query DataSets for GSE77790
Status Public on Apr 13, 2016
Title Differentially expressed genes after miRNA or siRNA transfection in human cancer cell lines II
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To identify differentially expressed genes by anti cancer treatments (microRNAs or siRNAs) in human cancer, several cell lines (pancreatic cancer, esophageal cancer, bladder cancer, prostate cancer, renal cell carcinoma and lung squamous cell carcinoma) were subjected to Agilent whole genome microarrays.
 
Overall design Human cell lines (Panc-1, sw1990, TE8, TE9, A549, MRC-5, BOY, T24, PC3, C4-2, 786-O, A-498 and EBC-1) were treated with miRNAs (miR-375, miR-29a, miR-26a, miR-145-5p, miR-145-3p, miR-218, miR-320a), siRNAs (si-MMP11, si-LAMP1, si-LOXL2, si-PLOD2, si-UHRF1, and si-FOXM1).
 
Contributor(s) Seki N, Goto Y
Citation(s) 27633630, 27862697, 27072587, 27779648, 27765924, 29050264
Submission date Feb 10, 2016
Last update date Oct 07, 2019
Contact name Naohiko Seki
E-mail(s) naoseki@faculty.chiba-u.jp
Phone +81-43-226-2971
Organization name Chiba University
Department Functional Genomics
Street address 1-8-1, Inohana
City Chiba
State/province Chiba
ZIP/Postal code 260-8670
Country Japan
 
Platforms (1)
GPL20844 Agilent-072363 SurePrint G3 Human GE v3 8x60K Microarray 039494 [Feature Number Version]
Samples (32)
GSM2059404 Identification of miR-145-5p target genes in EBC-1
GSM2059405 Identification of miR-145-3p target genes in EBC-1
GSM2059406 Identification of miR-218 target genes in EBC-1
Relations
BioProject PRJNA311555

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77790_RAW.tar 589.2 Mb (http)(custom) TAR (of TXT, XLSX)
Processed data included within Sample table
Processed data provided as supplementary file

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