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Series GSE78990 Query DataSets for GSE78990
Status Public on May 03, 2016
Title Two Conserved Histone Demethylases Regulate Mitochondrial Stress-Induced Longevity
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Summary Across eukaryotic species, mild mitochondrial stress can have beneficial effects on the lifespan of organisms. Mitochondrial dysfunction activates an unfolded protein response (UPRmt), a stress signaling mechanism designed to ensure mitochondrial homeostasis. Perturbation of mitochondria during larval development in C. elegans not only delays aging but also maintains UPRmt signaling, suggesting an epigenetic mechanism that modulates both longevity and mitochondrial proteostasis throughout life. Here we identify the conserved histone lysine demethylases jmjd-1.2/PHF8 and jmjd-3.1/JMJD3 as positive regulators of lifespan in response to mitochondrial dysfunction across species. Reduction-of-function of the demethylases potently suppresses longevity and UPRmt induction while gain-of-function is sufficient to extend lifespan in an UPRmt-dependent manner. A systems genetics approach in the BXD mouse reference population further indicated conserved roles of the mammalian orthologs in longevity and UPRmt signaling. These findings illustrate an evolutionary conserved epigenetic mechanism that determines the rate of aging downstream of mitochondrial perturbations.
 
Overall design Comparison of gene expression changes in response to cco-1 RNAi treatment, overexpression of jmjd-1.2 and overexpression of jmjd-3.1 in populations of C. elegans L4 animals
 
Contributor(s) Steffen KK, Merkwirth C, Dillin A
Citation(s) 27133168
Submission date Mar 08, 2016
Last update date May 15, 2019
Contact name Andrew Dillin
E-mail(s) dillin@berkeley.edu
Organization name University of California, Berkeley
Lab Dillin Lab, 430E Li Ka Shing
Street address 188 Li Ka Shing
City Berkeley
State/province CA
ZIP/Postal code 94720
Country USA
 
Platforms (1)
GPL18245 Illumina HiSeq 2500 (Caenorhabditis elegans)
Samples (15)
GSM2083167 N2 EV replicate 1
GSM2083168 N2 EV replicate 2
GSM2083169 N2 EV replicate 3
Relations
BioProject PRJNA314583
SRA SRP071287

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE78990_RAW.tar 1.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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