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Series GSE79070 Query DataSets for GSE79070
Status Public on Mar 11, 2016
Title The midguts transcriptome of Aedes aegypti (Liverpool strain) females knock down AaMesh and feed AaMesh antibody versus those knock down GFP and feed pre-immune.
Organism Aedes aegypti
Experiment type Expression profiling by high throughput sequencing
Summary We reported the RNA-seq based analyses of the transcriptional changes in the Aedes aegypti midguts knock down 3, 6days, feed antibody 18h transcriptome.
 
Overall design Comparison of the midguts transcriptome of Aedes aegypti females at two knockdown time points and one feed condition;

GFP dsRNA-3 or -6days: 3 or 6 days after 7day-old mosquitos were microinjected GFP dsRNA
AaMesh dsRNA-3 or -6days: 3 or 6 days after 7day-old mosquitos were microinjected AaMesh dsRNA
Pre-immune-18h: 18hrs after 7day-old wild type mosquitos were fed with Pre-immune
AaMesh antibody-18h: 18hrs after 7day-old wild type mosquitos were fed with AaMesh antibody
 
Contributor(s) Xiao X, Zhang R
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 10, 2016
Last update date May 15, 2019
Contact name Gong Cheng
E-mail(s) gongcheng@mail.tsinghua.edu.cn
Organization name Tsinghua University
Street address 4305 Biotechnology Building, Tsinghua University
City Beijing
ZIP/Postal code 100084
Country China
 
Platforms (1)
GPL21020 Illumina HiSeq 2000 (Aedes aegypti)
Samples (6)
GSM2084882 GFP dsRNA-3days
GSM2084883 AaMesh dsRNA-3days
GSM2084884 GFP dsRNA-6days
Relations
BioProject PRJNA314871
SRA SRP071587

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79070_18h_Pre-immune-VS-AaMesh_antibody.GeneDiffExp.txt.gz 913.2 Kb (ftp)(http) TXT
GSE79070_3_days_GFPdsRNA-VS-AaMeshdsRNA.GeneDiffExp.txt.gz 19.3 Kb (ftp)(http) TXT
GSE79070_6_days_GFPdsRNA-VS-AaMeshds_RNA.GeneDiffExp.txt.gz 979.6 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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