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Series GSE79626 Query DataSets for GSE79626
Status Public on Mar 24, 2017
Title Ribosome footprinting of fly heads
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary We applied ribosomal footprinting experiment followed by RNA-seq in order to detect circular RNA associated with ribosomes in fly heads.
 
Overall design Ribosome profiling of Drosophila fly heads. Two samples were treated with low detergent buffer and the other two with high detergent buffer.
 
Contributor(s) Kadener S
Citation(s) 28344080
Submission date Mar 25, 2016
Last update date May 15, 2019
Contact name Sebastian Kadener
E-mail(s) skadener@gmail.com
Organization name Brandeis University
Street address 415 South Street
City Waltham
State/province MA
ZIP/Postal code 9190401
Country USA
 
Platforms (1)
GPL19132 Illumina NextSeq 500 (Drosophila melanogaster)
Samples (4)
GSM2099089 low detergent rep 1
GSM2099090 low detergent rep 2
GSM2099091 High detergent rep 1
Relations
BioProject PRJNA316472
SRA SRP072369

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79626_list_circRNA_detected.xlsx 148.1 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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