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Series GSE79631 Query DataSets for GSE79631
Status Public on Mar 27, 2016
Title Global genome expression analysis of lamina propria derived WT and Nlrp6-/- Ly6C-hi inflammatory monocytes
Organism Mus musculus
Experiment type Expression profiling by array
Summary Nlrp6-/- lamina propria Ly6C-hi monocytes in response to AOM/DSS have deficient TNFα production, but increased production of other pro-inflammatory cytokines as compared to WT
NLRP6 is a member of the Nod-like receptor family, whose members are involved in the recognition of microbes and/or tissue injury. NLRP6 was previously demonstrated to regulate the production of IL-18 and is important for protecting mice against chemically-induced intestinal injury and colitis-associated colon cancer. However, the cellular mechanisms by which NLRP6 reduces susceptibility to colonic inflammation remain unclear. Here, we determined that NLRP6 expression is specifically upregulated in Ly6Chi inflammatory monocytes that infiltrate into the colon during dextran sulfate sodium (DSS)-induced inflammation. Adoptive transfer of WT Ly6Chi inflammatory monocytes into Nlrp6-/- mice was sufficient to protect them from mortality, significantly reducing intestinal permeability and damage. NLRP6-deficient inflammatory monocytes were specifically defective in TNFα production, which was important for reducing DSS-induced mortality and dependent on autocrine IL-18 signaling by inflammatory monocytes. Our data reveal a previously unappreciated role for NLRP6 in inflammatory monocytes, which are recruited during intestinal injury to promote barrier function and limit bacteria-driven inflammation. This study also highlights the importance of early cytokine responses, particularly NLRP6-dependent and IL-18-dependent TNFα production in preventing chronic dysregulated inflammation.
 
Overall design Ly6Chi monocytes were sorted from lamina propria of WT or Nlrp6-/- mice at day 10 of AOM/2%DSS. RNA was extracted and hybridized to the mouse 2.1 ST array.
 
Contributor(s) Chen GY, Seregin SS
Citation(s) 27353251
NIH grant(s)
Grant ID Grant title Affiliation Name
F32 CA200144 Understanding Nlrp6 function in inflammatory monocytes during inflammation and tumorigenesis REGENTS OF THE UNIVERSITY OF MICHIGAN - ANN ARBOR SEREGIN
R01 CA166879 Regulation of intestinal inflammation and tumorigenesis by Nlrp6 REGENTS OF THE UNIVERSITY OF MICHIGAN - ANN ARBOR CHEN
Submission date Mar 26, 2016
Last update date Mar 08, 2018
Contact name Sergey Seregin
E-mail(s) seregin@umich.edu
Organization name University of Michigan
Street address 1150 E Medical Center Drive
City Ann Arbor
State/province MI
ZIP/Postal code 48109
Country USA
 
Platforms (1)
GPL17400 [MoGene-2_1-st] Affymetrix Mouse Gene 2.1 ST Array [transcript (gene) version]
Samples (2)
GSM2099781 WT Ly6C-hi monocytes
GSM2099782 Nlrp6-/- Ly6C-hi monocytes
Relations
BioProject PRJNA316515

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79631_RAW.tar 9.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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