|
| Status |
Public on May 17, 2016 |
| Title |
Genome-wide maps in PDGFB-induced glioma |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We performed genome-wide profiling of oligodendrocyte lineage transcription factor 2 (Olig2) and other histone markers in platelet-derived growth factor subunit B (PDGFB)-induced glioma and genome-occupancy analyses coupled with transcriptome profiling to reveal gene regulatory network.
|
| |
|
| Overall design |
Examination of Olig2, H327Ac, and H3K4me3 genome-wide occupancy in PDGFB-induced Ctrl-T and Olig2cKO brain tumors (gliomas).
|
| Web link |
http://www.cell.com/cancer-cell/abstract/S1535-6108%2816%2930110-6
|
| |
|
| Contributor(s) |
Lu F, Zhao C, Lu R |
| Citation(s) |
27165742 |
| |
| Submission date |
Apr 08, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Richard Lu |
| Organization name |
Cincinnati Children's Hospital Medical Center
|
| Department |
CBDI
|
| Lab |
Lu Lab,T6.525
|
| Street address |
3333 Burnet Ave
|
| City |
Cincinnati |
| State/province |
OH |
| ZIP/Postal code |
45229 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (5)
|
|
| This SubSeries is part of SuperSeries: |
| GSE80089 |
Gene expression profiling and genome-wide maps in PDGFB-induced glioma |
|
| Relations |
| BioProject |
PRJNA317783 |
| SRA |
SRP073043 |
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