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| Status |
Public on Mar 11, 2008 |
| Title |
Gene expression in the quail MBH under short and long day conditions. |
| Platform organism |
Gallus gallus |
| Sample organism |
Coturnix japonica |
| Experiment type |
Expression profiling by array
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| Summary |
Various physiological processes and behaviours are controlled by changing daylength.
To dissect genes involved in the photoperiodic changes in physiology and behaviour, global expression analysis was performed using quail kept under short and long day conditions.
Keywords: time course
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| Overall design |
The mediobasal hypothalamus (MBH) of quail kept under short day condition (6h light:18h dark) or long day condition (20h light:4h dark) were collected for RNA extraction. Pooled total RNA from three MBHs was labelled and hybridized on Affymetrix microarrays. Samples were collected from 6 birds every 4h during a 24 h cycle and were analyzed in duplicate set of array (two biological replicates).
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| Contributor(s) |
Nakao N, Ono H, Yamamura T, Anraku T, Takagi T, Higashi K, Yasuo S, Katou Y, Kageyama S, Uno Y, Kasukawa T, Iigo M, Sharp PJ, Iwasawa A, Suzuki Y, Sugano S, Niimi T, Mizutani M, Namikawa T, Ebihara S, Ueda HR, Yoshimura T |
| Citation(s) |
18354476 |
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| Submission date |
Jun 05, 2007 |
| Last update date |
Mar 17, 2012 |
| Contact name |
Takashi Yoshimura |
| E-mail(s) |
takashiy@agr.nagoya-u.ac.jp
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| Phone |
+81-52-789-4056
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| Fax |
+81-52-789-4056
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| Organization name |
Nagoya University
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| Department |
Graduate School of Bioagricultural Sciences
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| Lab |
Lab. of Animal Functional Genomics
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| Street address |
Furo-cho, Chikusa-ku
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| City |
Nagoya |
| State/province |
Aichi |
| ZIP/Postal code |
464-8601 |
| Country |
Japan |
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| Platforms (1) |
| GPL3213 |
[Chicken] Affymetrix Chicken Genome Array |
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| Samples (24)
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| GSM197981 |
quail, short day condition at ZT2, biological rep1 |
| GSM197982 |
quail, short day condition at ZT2, biological rep2 |
| GSM197983 |
quail, short day condition at ZT6, biological rep1 |
| GSM197984 |
quail, short day condition at ZT6, biological rep2 |
| GSM197985 |
quail, short day condition at ZT10, biological rep1 |
| GSM197986 |
quail, short day condition at ZT10, biological rep2 |
| GSM197987 |
quail, short day condition at ZT14, biological rep1 |
| GSM197988 |
quail, short day condition at ZT14, biological rep2 |
| GSM197989 |
quail, short day condition at ZT18, biological rep1 |
| GSM197990 |
quail, short day condition at ZT18, biological rep2 |
| GSM197991 |
quail, short day condition at ZT22, biological rep1 |
| GSM197992 |
quail, short day condition at ZT22, biological rep2 |
| GSM197993 |
quail, long day condition at ZT2, biological rep1 |
| GSM197994 |
quail, long day condition at ZT2, biological rep2 |
| GSM197995 |
quail, long day condition at ZT6, biological rep1 |
| GSM197996 |
quail, long day condition at ZT6, biological rep2 |
| GSM197997 |
quail, long day condition at ZT10, biological rep1 |
| GSM197998 |
quail, long day condition at ZT10, biological rep2 |
| GSM197999 |
quail, long day condition at ZT14, biological rep1 |
| GSM198000 |
quail, long day condition at ZT14, biological rep2 |
| GSM198001 |
quail, long day condition at ZT18, biological rep1 |
| GSM198002 |
quail, long day condition at ZT18, biological rep2 |
| GSM198003 |
quail, long day condition at ZT22, biological rep1 |
| GSM198004 |
quail, long day condition at ZT22, biological rep2 |
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| Relations |
| BioProject |
PRJNA100817 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE8018_RAW.tar |
209.1 Mb |
(http)(custom) |
TAR (of CEL, CHP) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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