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| Status |
Public on Jul 04, 2016 |
| Title |
Knock-down of the methyltransferase Kmt6 reliefs H3K27me3 and results in induction of cryptic and otherwise silent secondary metabolite gene clusters in Fusarium fujikuroi [ChIP-seq] |
| Organism |
Fusarium fujikuroi |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
We performed ChIP-seq of H3K27me3 in wild type Fusarium fujikuroi grown in synthetic ICI medium with low nitrogen conditions.
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| |
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| Overall design |
Three replicates of F. fujikuroi wild-type strain were grown in low nitrogen. ChIP-Seq was performed with anti-H3K27me3 antibody.
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| Contributor(s) |
Studt L, Rösler SM, Burkhardt I, Arndt B, Freitag M, Humpf H, Dickschat JS, Tudzynski B |
| Citation(s) |
27348741 |
| |
| Submission date |
Apr 20, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Ulrich Guldener |
| E-mail(s) |
u.gueldener@tum.de
|
| Organization name |
Technische Universität München
|
| Department |
Chair of genome-oriented bioinformatics
|
| Street address |
Maximus-von-Imhof-Forum 3
|
| City |
Freising |
| State/province |
Bavaria |
| ZIP/Postal code |
D-85354 |
| Country |
Germany |
| |
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| Platforms (1) |
| GPL17016 |
Illumina Genome Analyzer IIx (Fusarium fujikuroi) |
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| Samples (3) |
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| This SubSeries is part of SuperSeries: |
| GSE80479 |
Knock-down of the methyltransferase Kmt6 reliefs H3K27me3 and results in induction of cryptic and otherwise silent secondary metabolite gene clusters in Fusarium fujikuroi |
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| Relations |
| BioProject |
PRJNA319024 |
| SRA |
SRP073614 |
