NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE80814 Query DataSets for GSE80814
Status Public on May 24, 2017
Title IL-2 therapy restores regulatory T cell dysfunction induced by calcineurin inhibitors
Organism Mus musculus
Experiment type Expression profiling by array
Summary CNIs drastically modify the Treg specific transcriptional program in vivo in an IL-2 dependent manner
CD4+CD25+FOXP3+ regulatory T cells (Tregs) constitute a heterogeneous lymphocyte subpopulation essential for establishing peripheral immune tolerance. Interleukin-2 (IL-2) plays a critical role in maintaining immune homeostasis promoting optimal development, survival and function of Tregs. Because of their suppressive properties, manipulation of Tregs represents a clear target to modulate immune responses in transplantation and autoimmunity. However, the specific effects of adjunctive immunosuppressive drugs to the maintenance and function of the different Treg subsets remain unclear. Calcineurin inhibitors (CNIs), which are the mainstay immunosuppressants in transplantation, are the most effective agents in controlling alloreactive effector T cells, but also hamper Treg activity. In this study we sought to investigate the differential effects of CNIs on the homeostasis of Treg subsets, and the extent to which these effects are dependent on the overall availability of IL-2.
 
Overall design 30 total samples were analyzed and classified in 8 different groups (at least 3 replicates per group): Treg and Teff from mouse treated with PBS (CN), tacrolimus (TAC), IL2 and combination of tacrolimus and IL-2 (TAC+IL-2). Treg specific signature was identified by comparing Tref-CN vs Teff-CN. The genes were ranked based on FDR and the TOP50 were selected as Treg-related genes. To assess the transcriptional effect of tacrolimus and IL-2 to Tregs, the gene expression of the different Treg isolated from the treated mice were compared to Teff-CN or Treg-CN.
 
Contributor(s) Martinez-Llordella M, Sanchez-Fueyo A, Gray E, Lozano J
Citation(s) 28584086, 36389734
Submission date Apr 29, 2016
Last update date Dec 01, 2022
Contact name MARC MARTINEZ-LLORDELLA
E-mail(s) marc.martinez-llordella@kcl.ac.uk
Organization name King's College London
Department Liver Science Department
Street address 3rd Floor Cheyne Wing, Denmark Hill
City London
ZIP/Postal code SE5 9RS
Country United Kingdom
 
Platforms (1)
GPL21798 [MoGene-2_1-st] Affymetrix Mouse Gene 2.1 ST Array [CDF: mogene21st_Mm_ENTREZG_18.0.0]
Samples (30)
GSM2138273 Spleen Treg IL-2 rep1
GSM2138274 Spleen Treg IL-2 rep2
GSM2138275 Spleen Treg CN rep1
Relations
BioProject PRJNA320061

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE80814_RAW.tar 142.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap