|
| Status |
Public on Nov 30, 2016 |
| Title |
Dietary intake influences fertility and offspring development in zebrafish. |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report that increased nutrient availability increases breeding success and egg production. RNA-seq analysis revealed that parental diet altered the expression of metabolic genes in the unfertilized eggs. Offspring from the differentially fed parents showed altered survival and energy expenditure as adults.
|
| |
|
| Overall design |
RNA from unfertilized eggs after two parental diets.
|
| |
|
| Contributor(s) |
Horsfield J, Meier M, Newman T |
| Citation(s) |
27870856 |
| |
| Submission date |
May 02, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Julia Horsfield |
| Organization name |
University of Otago
|
| Department |
Department of Pathology
|
| Lab |
Chromosome Structure and Development Group
|
| Street address |
58 Hanover Street
|
| City |
Dunedin |
| ZIP/Postal code |
9016 |
| Country |
New Zealand |
| |
|
| Platforms (1) |
| GPL18413 |
Illumina HiSeq 2500 (Danio rerio) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA320266 |
| SRA |
SRP074244 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE81007_cds.diff.gz |
534.3 Kb |
(ftp)(http) |
DIFF |
| GSE81007_cds.fpkm_tracking.gz |
1.3 Mb |
(ftp)(http) |
FPKM_TRACKING |
| GSE81007_cds_exp.diff.gz |
1.2 Mb |
(ftp)(http) |
DIFF |
| GSE81007_gene_exp.diff.gz |
1.1 Mb |
(ftp)(http) |
DIFF |
| GSE81007_genes.fpkm_tracking.gz |
1.3 Mb |
(ftp)(http) |
FPKM_TRACKING |
| GSE81007_isoform_exp.diff.gz |
1.6 Mb |
(ftp)(http) |
DIFF |
| GSE81007_isoforms.fpkm_tracking.gz |
2.3 Mb |
(ftp)(http) |
FPKM_TRACKING |
| GSE81007_promoters.diff.gz |
647.2 Kb |
(ftp)(http) |
DIFF |
| GSE81007_splicing.diff.gz |
727.8 Kb |
(ftp)(http) |
DIFF |
| GSE81007_tss_group_exp.diff.gz |
1.3 Mb |
(ftp)(http) |
DIFF |
| GSE81007_tss_groups.fpkm_tracking.gz |
1.5 Mb |
(ftp)(http) |
FPKM_TRACKING |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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