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Series GSE81028 Query DataSets for GSE81028
Status Public on Nov 14, 2016
Title Nucleosome occupancy as a novel chromatin parameter for replication origin functions
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary This study defines nucleosome occupancy as a novel parameter for regulating origin activities. Nucleosome occupancy at origins was assessed using histone H3 ChIP-seq during G1 and G2M. Origin activity was determined using BrdU ChIP-seq.
 
Overall design Nucleosome occupancy at origins was assessed using histone H3 ChIP-seq during G1 and G2M.
 
Contributor(s) Rodriguez J, Lee L, Lynch B, Tsukiyama T
Citation(s) 27895110
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 GM111428 Mechanisms and functions of chromatin regulation for cell-cycle control FRED HUTCHINSON CANCER RESEARCH CENTER TSUKIYAMA
Submission date May 02, 2016
Last update date May 15, 2019
Contact name Laura Lee
E-mail(s) ljlee@uw.edu
Organization name Fred Hutchinson Cancer Research Center
Department Basic Sciences
Street address 1100 Fairview Ave N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platforms (1)
GPL9134 Illumina Genome Analyzer (Saccharomyces cerevisiae)
Samples (37)
GSM2140815 WT H3 ChIP G1 Input Rep1
GSM2140816 WT H3 ChIP G1 Input Rep2
GSM2140817 WT H3 ChIP G1 IP Rep1
Relations
BioProject PRJNA320311
SRA SRP074254

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Supplementary file Size Download File type/resource
GSE81028_RAW.tar 1.4 Gb (http)(custom) TAR (of SGR)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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