|
| Status |
Public on Apr 05, 2017 |
| Title |
Genome-wide identification and characterization of small RNAs in Rhodobacter capsulatus and identification of small RNAs affected by loss of the response regulator CtrA |
| Organism |
Rhodobacter capsulatus |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
We present the first genome-wide identification and characterizaion of 422 novel sRNAs in R. capsulatus. In addition we report a comparative analysis of conserved sRNAs across 24 bacterial species.
|
| |
|
| Overall design |
Genome-wide identification of sRNAs in R. capsulatus
|
| Web link |
http://www.tandfonline.com/doi/full/10.1080/15476286.2017.1306175
|
| |
|
| Contributor(s) |
Grüll MP, Peña-Castillo L, Mulligan ME, Lang AS |
| Citation(s) |
28296577 |
| Submission date |
May 31, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Marc Patrick Grüll |
| E-mail(s) |
mpg226@mun.ca
|
| Organization name |
Memorial University of Newfoundand
|
| Department |
Biology
|
| Lab |
Andrew S. Lang
|
| Street address |
230 Elizabeth Ave
|
| City |
St John's |
| State/province |
Newfoundland |
| ZIP/Postal code |
A1B 3X9 |
| Country |
Canada |
| |
|
| Platforms (1) |
| GPL20771 |
Ion Torrent PGM (Rhodobacter capsulatus) |
|
| Samples (2) |
|
| Relations |
| BioProject |
PRJNA323840 |
| SRA |
SRP075912 |
