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Series GSE82438

Query DataSets for GSE82438

Status

Public on Jun 22, 2016

Title

ChIP-seq from embryonic facial prominence (ENCSR106QSU)

Project

Mouse ENCODE

Organism

Mus musculus

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

H3K4me3 ChIP-seq on embryonic 12.5 day mouse embryonic facial prominence

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR106QSU/

Citation(s)

22955616

BioProject

PRJNA63471

Submission date

Jun 07, 2016

Last update date

May 15, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL21103

Illumina HiSeq 4000 (Mus musculus)

Samples (2)

GSM2191174	ChIP-seq from embryonic facial prominence (ENCLB890ZKF)
GSM2191175	ChIP-seq from embryonic facial prominence (ENCLB649ZOO)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE82438_ENCFF142CKQ_peaks_mm10.bed.gz	614.3 Kb	(ftp)(http)	BED
GSE82438_ENCFF291COW_signal_p-value_mm10.bigWig	853.6 Mb	(ftp)(http)	BIGWIG
GSE82438_ENCFF306LDH_replicated_peaks_mm10.bed.gz	624.6 Kb	(ftp)(http)	BED
GSE82438_ENCFF352UMI_peaks_mm10.bigBed	1.8 Mb	(ftp)(http)	BIGBED
GSE82438_ENCFF508WCS_fold_change_over_control_mm10.bigWig	1.0 Gb	(ftp)(http)	BIGWIG
GSE82438_ENCFF517PZH_replicated_peaks_mm10.bigBed	1.5 Mb	(ftp)(http)	BIGBED
GSE82438_RAW.tar	2.2 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record