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Series GSE83988 Query DataSets for GSE83988
Status Public on Dec 25, 2018
Title HIF-1α activation is sufficient for the development of MDS
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Hypoxia inducible factor-1α (HIF-1α) is a critical transcription factor for the hypoxic response, angiogenesis, normal hematopoietic stem cell regulation, and cancer development. Importantly, HIF-1α is also a key regulator for immune cell activation. In order to determine whether HIF-1α is sufficient for developing MDS phenotypes, we generated blood specific inducible HIF-1α transgenic mice. Using Vav1-Cre/Rosa26-loxP-Stop-loxP (LSL) rtTA driver, stable HIF-1α can be induced in a doxycycline administration dependent manner. After induction, HIF-1α-induced mice developed thrombocytopenia, leukocytopenia, macrocytic anemia, and multi-lineage dysplasia. We also found activation of both innate and adaptive immunity in HIF-1α- induced mice compared to those from control mice. Taken together, these data suggest that HIF-1α is sufficient to trigger a variety of key MDS features
 
Overall design Expression profiles of mRNA in HSPCs from constitutively active form of HIF1a protein induced mice and their control mice.
 
Contributor(s) Hayashi Y, Huang G
Citation(s) 30139811
Submission date Jul 04, 2016
Last update date May 15, 2019
Contact name Yoshihiro Hayashi
Organization name Tokyo University of Pharmacy and Life Sciences
Lab Laboratory of Oncology
Street address 1432-1 Horinouchi
City Hachioji
State/province Tokyo
ZIP/Postal code 1920392
Country Japan
 
Platforms (1)
GPL15103 Illumina HiSeq 1000 (Mus musculus)
Samples (4)
GSM2224911 Wild_type_Control_1
GSM2224912 Wild_type_Control_2
GSM2224913 Inducible_HIF1a_1
Relations
BioProject PRJNA327751
SRA SRP077870

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83988_countsTable.xls.gz 378.3 Kb (ftp)(http) XLS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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