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| Status |
Public on Jun 21, 2018 |
| Title |
Mutation of S-adenosyl-methionine synthetase 3 (SAMS3) releases transcriptional silencing by reducing DNA and histone methylation in Arabidopsis |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
|
| Summary |
Arabidopsis SAMS3 regulates epigenetic status through controlling DNA and histone methylation.The mutation in SAMS3 decreased the CHG and CHH methylation and reactivation of certain transposable elements.
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| |
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| Overall design |
Examination of whole genomic DNA methylation and gene expression in L119 (a transgenic lines used as WT) and sams3.
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| |
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| Contributor(s) |
Meng J, Wang L, Cheng J, Zhao X, Jin D, Li Q, Gong Z |
| Citation(s) |
29572390 |
| |
| Submission date |
Jul 05, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Jinkui Cheng |
| E-mail(s) |
chengjinkui@cau.edu.cn
|
| Organization name |
China Agricultural University
|
| Lab |
Zhizhong Gong
|
| Street address |
No.2 Yuanmingyuan West Road
|
| City |
Beijing |
| ZIP/Postal code |
100193 |
| Country |
China |
| |
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| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
|
| Samples (6)
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| Relations |
| BioProject |
PRJNA327822 |
| SRA |
SRP077917 |
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