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Series GSE84394 Query DataSets for GSE84394
Status Public on Nov 05, 2019
Title Zebrafish liver transcriptome in response to chronic treatment with environmentally relevant concentrations of imatinib mesylate
Organism Danio rerio
Experiment type Expression profiling by array
Summary Imatinib mesylate (IM) a protein kinase inhibitor drug that selectively inhibits certain oncogenic mutant protein tyrosine kinases. After application, IM is via hospital and municipal waste water effluents released into the aquatic environment, where it can harm non-target organisms. The aim of this study was to evaluate changes in gene transcription in liver of adult F1 zebrafish (Danio rerio) continuously exposed to IM at environmentaly relevant concentrations of 0.01 µg/L and 1 µg/L.
 
Overall design One color design, control and treatment in two concentrations; 6 pools of 1-3 individuals per treatment
 
Contributor(s) Baebler Š, Rotter A
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Submission date Jul 14, 2016
Last update date Nov 06, 2019
Contact name Spela Baebler
E-mail(s) spela.baebler@nib.si
Organization name National Institute of Biology
Department Department of Biotechnology and Systems Biology
Street address Vecna pot 111
City Ljubljana
ZIP/Postal code 1000
Country Slovenia
 
Platforms (1)
GPL14664 Agilent-026437 D. rerio (Zebrafish) Oligo Microarray V3 (Probe Name version)
Samples (18)
GSM2232963 Control_F1 (IM study)
GSM2232964 Control_F2 (IM study)
GSM2232965 Control_F3 (IM study)
Relations
BioProject PRJNA329075

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84394_RAW.tar 167.0 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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