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Series GSE84614 Query DataSets for GSE84614
Status Public on Sep 12, 2016
Title Fetal Brain lesions after subcutaneous inoculation of Zika virus in a pregnant nonhuman primate
Organism Macaca nemestrina
Experiment type Expression profiling by high throughput sequencing
Summary ZIKV was inoculated (strain FSS13025, Cambodia 2010) subcutaneously at five separate locations on the forearms, each with 107 plaque-forming units (PFU) into a healthy pregnant pigtail macaque at 119 days gestation (~28 weeks human pregnancy) to test directly whether ZIKV causes fetal brain injury.
 
Overall design Brain tissues from dam and fetus at necropsy (day 43 post-inoculation) were sequenced. A pigtail macaque brain sample from the Non-Human Primate Reference Transcriptome Project (NHPRTR.org) was used as a control
 
Contributor(s) Waldorf KA, Gale M Jr, Stencel-Baerenwald JE, Green R, Tisoncik-Go J
Citation(s) 27618651
Submission date Jul 20, 2016
Last update date May 15, 2019
Contact name Michael Gale, Jr
E-mail(s) uw_galelab_geo@uw.edu
Organization name University of Washington
Department Immunology
Street address 750 Republican St. E360, Box 358059
City Seattle
State/province Washington
ZIP/Postal code 98109
Country USA
 
Platforms (1)
GPL22173 Illumina NextSeq 500 (Macaca nemestrina)
Samples (3)
GSM2242962 Mock Brain
GSM2242963 Fetal Brain
GSM2242964 Dam Brain
Relations
BioProject PRJNA330665
SRA SRP078986

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84614_rhesus_counts.txt.gz 139.6 Kb (ftp)(http) TXT
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Processed data are available on Series record
Raw data are available in SRA

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