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| Status |
Public on Feb 10, 2017 |
| Title |
Evaluation of ccpA deletion on global gene expression of three M serotype strains of group A streptococcus |
| Organism |
Streptococcus sp. 'group A' |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We sought to determine how deletion of ccpA affects the gene expression profile in three M serotype strains of group A streptococcus
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| |
|
| Overall design |
There were 6 strains analyzed, each in quadruplicate replicates: 1) wild-type MGAS2221 ; 2) MGAS2221 ccpA deletion strain; 3) wild-type MGAS10870; 4) MGAS10870 ccpA deletion strain; 5) wild-type MGAS6180; 6) MGAS6180 ccpA deletion strain
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| |
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| Contributor(s) |
Shelburne SA, DebRoy S, Yao H, Travisany D, Latorre M |
| Citation(s) |
27580596 |
| |
| Submission date |
Jul 20, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Samuel Shelburne |
| E-mail(s) |
sshelburne@mdanderson.org
|
| Phone |
713-792-3629
|
| Organization name |
MD Anderson Cancer Center
|
| Department |
Infectious Diseases
|
| Street address |
1515 Holcombe Blvd
|
| City |
Houston |
| State/province |
TX |
| ZIP/Postal code |
77030 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL19691 |
Illumina HiSeq 2000 (Streptococcus sp. 'group A') |
|
| Samples (24)
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|
| Relations |
| BioProject |
PRJNA330717 |
| SRA |
SRP079006 |
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