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| Status |
Public on Apr 30, 2017 |
| Title |
Transcriptome analysis of hopanoid biosynthetic mutant of Rhodopseudomonas palustris TIE-1 |
| Organism |
Rhodopseudomonas palustris |
| Experiment type |
Expression profiling by array
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| Summary |
To understand the role of pentacyclic triterpenoids, we used whole genome microarray expression profiling of wild type and hopanoid deficient mutant. Hopanoid deficiency may leads to weakened structural integrity of cell membrane and may affect the other structures within or spanning cell envelope resulting in impaired lipid ordering which is linked to permeability, fluidity, permeability barrier, ion conductivity, cell potential, cell signalling and lateral segregation. Hopanoids are involved in antibiotic resistance and tolerance to stress, but the precise understanding is lacking. Understanding the role of hopanoids in shaping membrane properties would provide an important step towards bridging this gap.
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| Overall design |
Organism : Rhodopseudomonas palustris, Agilent custom R palustris Gene Expression 8x15k Array (AMADID: 075878) designed by Genotypic Technology Private Limited
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| Contributor(s) |
Lodha T, Ramana V |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jul 28, 2016 |
| Last update date |
May 01, 2017 |
| Contact name |
Genotypic technology |
| E-mail(s) |
sudha.rao@genotypic.co.in
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| Organization name |
Genotypic Technology
|
| Street address |
259, Apoorva 4th cross,80 feet Road,RMV 2ND STAGE
|
| City |
Bangalore |
| State/province |
Karnataka |
| ZIP/Postal code |
560094 |
| Country |
India |
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| Platforms (1) |
| GPL22254 |
Agilent custom R palustris Gene Expression 8x15k Array (AMADID: 075878) by Genotypic Technology Private Ltd |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA335757 |
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