|
| Status |
Public on Mar 08, 2017 |
| Title |
Genome-wide profiling of DNA methylation patterns in iAs-transformed cells |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
To examine the global impact of iAs on DNA methylation patterns. Genomic DNA was Bisulfite converted and analyzed using Mini methly-seq.
|
| |
|
| Overall design |
DNA from both NT and iAs-transformed cells were bisulfite converted and used for analysis through Minimethyl-seq
|
| |
|
| Contributor(s) |
Rea M, Eckstein M, Eleazer R, Smith C, Fondufe-Mittendorf Y |
| Citation(s) |
28150704 |
| |
| Submission date |
Jul 30, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Yvonne Nsokika Fondufe-Mittendorf |
| E-mail(s) |
y.fondufe-mittendorf@uky.edu
|
| Phone |
8593230091
|
| Organization name |
University of Kentucky
|
| Department |
Biochemistry
|
| Lab |
Mittendorf
|
| Street address |
741 South Limestone dr.
|
| City |
Lexington |
| State/province |
KY |
| ZIP/Postal code |
40536-0509 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
| GPL18460 |
Illumina HiSeq 1500 (Homo sapiens) |
|
| Samples (4)
|
| GSM2412752 |
DNA methylation in NT cells_Replicate 2 |
|
| Relations |
| BioProject |
PRJNA335883 |
| SRA |
SRP080465 |
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