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Series GSE85098 Query DataSets for GSE85098
Status Public on Aug 02, 2017
Title Expression data from AEG-1fl/fl and AEG-1DHEP mice which have conditional hepatocyte-specific knockout of AEG-1 (Astrocyte elevated gene 1)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary AEG-1 is overexpressed in human hepatocellular carcinoma (HCC) and positively regulates development and progression of HCC
A conditional hepatocyte-specific knockout mouse was generated by crossing floxed AEG-1 mouse with Alb/Cre mouse in C57BL/6 background
 
Overall design Livers were harvested from chow-fed 12 wks old AEG-1fl/fl and AEG-1DHEP mice. RNA was extracted and subjected to RNA-Seq.
 
Contributor(s) Sarkar D, Dozmorov M
Citation(s) 28437865
Submission date Aug 02, 2016
Last update date May 15, 2019
Contact name Mikhail Dozmorov
E-mail(s) mdozmorov@vcu.edu
Organization name Virginia Commonwealth University
Department Biostatistics
Street address 830 E Main St
City Richmond
State/province VA
ZIP/Postal code 23298
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM2257685 AEG_1CKO_chow_3230 biological rep1
GSM2257686 AEG_1CKO_chow_3231 biological rep2
GSM2257687 AEG_1CKO_chow_3232 biological rep3
Relations
BioProject PRJNA336171
SRA SRP080807

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE85098_counts.txt.gz 2.7 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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