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Series GSE85999 Query DataSets for GSE85999
Status Public on Sep 01, 2016
Title Determining Neurovirulance host expression patterns in diverse genetic backgrounds [brain]
Organism Mus musculus
Experiment type Expression profiling by array
Other
Summary To accurately identify the unique transcriptional signatures in collaborative cross mice after exposure to West Nile Virus (or mock/no virus) , RNA isolated from Brain tissue and was analyzed using the nanostring immunology panel.
 
Overall design We screened RNA from 95 spleen samples over 8 different CC backgrounds. Across the 8 CC lines. Samples were captured at 4, 7, and 12 days post infection of West Nile Virus (WNV).
 
Contributor(s) Green R, Wilkins C, Thomas S, Gale jr M
Citation(s) 27872814
NIH grant(s)
Grant ID Grant title Affiliation Name
U19 AI100625 Systems Immunogenetics of Biodefense Pathogens in the Collaborative Cross UNIVERSITY OF NORTH CAROLINA AT CHAPEL HILL Mark T Heise, Ralph S Baric
Submission date Aug 24, 2016
Last update date Dec 01, 2016
Contact name Michael Gale, Jr
E-mail(s) uw_galelab_geo@uw.edu
Organization name University of Washington
Department Immunology
Street address 750 Republican St. E360, Box 358059
City Seattle
State/province Washington
ZIP/Postal code 98109
Country USA
 
Platforms (1)
GPL22364 nCounter Mouse PanCancer Immune Profiling Panel
Samples (95)
GSM2290358 Brain_West Nile Virus_Infected_4days_rep1 [3252x8042]
GSM2290359 Brain_West Nile Virus_Infected_4days_rep2 [3252x8042]
GSM2290360 Brain_West Nile Virus_Infected_4days_rep3 [3252x8042]
Relations
BioProject PRJNA339974

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE85999_RAW.BRAIN.NS.txt.gz 103.1 Kb (ftp)(http) TXT
GSE85999_RAW.tar 860.0 Kb (http)(custom) TAR (of RCC)
Processed data included within Sample table
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