|
| Status |
Public on Sep 13, 2016 |
| Title |
Global Regulation of Alternative RNA Splicing by the SR-Rich Protein RBM39 |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RBM39 is extensively involved in alternative splicing of RNA and helps regulate transcript levels. RBM39 may modulate alternative splicing similarly to U2AF65 by either directly binding to RNA or recruiting other splicing factors, such as U2AF65.
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| |
|
| Overall design |
RNA extracted from wild-type and RBM39-deficient human breast adenocarcinoma MCF-7 cells was subjected to RNA-Seq, and alternative splicing events in the two cell types were analyzed and compared.
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| |
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| Citation(s) |
27354116 |
| |
| Submission date |
Sep 12, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Mai Sanyue |
| E-mail(s) |
syue_356@163.com
|
| Organization name |
Beijing Institute of Biotechnology
|
| Street address |
27 Taiping Rd, Haidian District
|
| City |
Beijing |
| ZIP/Postal code |
100850 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (3) |
|
| Relations |
| BioProject |
PRJNA342707 |
| SRA |
SRP089740 |
