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Series GSE87305 Query DataSets for GSE87305
Status Public on Sep 24, 2016
Title Expression data from hematopoietic stem cells from Zeb2-KO (Zeb2Δ/ΔMx1-Cre) mice versus WT mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary Zeb2 has been shown to influence hematopoietic differentiation and loss thereof leads to complex differentiation defects in multiple hematopoietic lineages.
We used microarrays to compare the expresssion profile of Zeb2-defective with WT hematopoietic stem cells and identified several dinstict classes of up-regulated genes during this process.
 
Overall design A population of cells highly enriched for hematopoietic stem cells (LKS-Slam marker positive cells) was sorted by flow cytometry from bone marrow of (Zeb2Δ/ΔMx1-Cre) mice and WT mice eight weeks after induction with pIC. Total RNA was RNA extracted and hybridised on Affymetrix microarrays. We used three distict biological replicates from each the Zeb2Δ/ΔMx1-Cre cells versus WT (control) cells.
 
Contributor(s) Janzen V
Citation(s) 27683414
Submission date Sep 23, 2016
Last update date Mar 04, 2019
Contact name Viktor Janzen
E-mail(s) janzen.viktor@gmail.com
Organization name University of Bonn
Street address Sigmund-Freud-Str. 25
City Bonn
ZIP/Postal code 53127
Country Germany
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (6)
GSM2327622 Zeb2KO LKS-Slam cells, biological rep1
GSM2327623 Zeb2KO LKS-Slam cells, biological rep2
GSM2327624 Zeb2KO LKS-Slam cells, biological rep3
Relations
BioProject PRJNA344304

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE87305_RAW.tar 23.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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