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Series GSE87878 Query DataSets for GSE87878
Status Public on Nov 22, 2017
Title Comparing the transcriptomes of ovaries from prolific Jintang black goat and non-prolific Tibetan goat (Capra hircus) during follicular phase
Organism Capra hircus
Experiment type Expression profiling by high throughput sequencing
Summary The present study, for the first time, compared the transcriptomes of ovaries from the prolific Jintang black goat and the non-prolific Tibetan goat during follicular phase using the Illumina RNA-Seq method. The study provides insight into the transcriptional regulation in the ovaries of two distinct breeds of goats that might serve as a key resource for understanding goat fecundity.
 
Overall design Total RNA obtained from ovaries of the prolific Jintang black goat and the non-prolific Tibetan goat during follicular phase, then tanscriptomes of the two breeds were campared.
 
Contributor(s) Zi X, Lu J, Ma L, Xia W
Citation(s) 29134700
Submission date Oct 12, 2016
Last update date May 15, 2019
Contact name Xiang-dong Zi
E-mail(s) zixd2000@yahoo.com
Phone 86-28-85528868
Organization name Southwest University for Nationalities
Street address Yi Huan Lu
City Chengdu
ZIP/Postal code 610041
Country China
 
Platforms (1)
GPL15473 Illumina HiSeq 2000 (Capra hircus)
Samples (6)
GSM2342194 Non-prolific Tibetan goat No. 1
GSM2342195 Non-prolific Tibetan goat No. 2
GSM2342196 Non-prolific Tibetan goat No. 3
Relations
BioProject PRJNA348096
SRA SRP091441

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE87878_RAW.tar 1.1 Mb (http)(custom) TAR (of TXT)
GSE87878_all.gene.FPKM.txt.gz 351.1 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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