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| Status |
Public on Aug 08, 2017 |
| Title |
Drosophila Cbp80 is needed for the expression of piRNA components and piRNAs |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
piRNAs expression analysis in dissected Drosophila ovaries, focused on the 42ab and flamenco locus
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| Overall design |
Germline tissue expressing reduced levels of Cbp80 (shRNA treatment knocked down Cbp80 specifically in the germline) was used to isolate small RNAs. Small RNA reads were compared to small RNA reads after knock down treatment of a control gene / mRNA (mCherry-Jupiter)
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| Contributor(s) |
Rashpa R, Vazquez-Pianzola P, Colombo M, Bruggmann R, Suter B |
| Citation(s) |
28746365 |
| |
| Submission date |
Oct 20, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Rémy Bruggmann |
| E-mail(s) |
remy.bruggmann@bioinformatics.unibe.ch
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| Organization name |
University of Bern
|
| Street address |
Baltzerstrasse 6
|
| City |
Bern |
| ZIP/Postal code |
3012 |
| Country |
Switzerland |
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| Platforms (1) |
| GPL13304 |
Illumina HiSeq 2000 (Drosophila melanogaster) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA349481 |
| SRA |
SRP091881 |
