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Series GSE89018 Query DataSets for GSE89018
Status Public on Oct 22, 2016
Title Cry2 and Fbxl3 promote circadian destruction of c-Myc
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Examination of gene expression changes caused by genetic deletion of Cry2 in MEFs with samples collected over a 24 hour time course after circadian synchronization
 
Overall design Primary wildtype and Cry2-/- MEFs derived from littermate embryos were treated with dexamethasone to synchronize circadian rhythms. Samples were collected in quadruplicate every four hours for 24 hours.
 
Contributor(s) Huber A, Papp SJ, Henriksson E, Jordan SD, Kriebs A, Nguyen M, Wallace M, Li Z, Metallo CM, Lamia KA
Citation(s) 27840026, 32139766
Submission date Oct 21, 2016
Last update date Mar 16, 2020
Contact name Katja Lamia
E-mail(s) klamia@scripps.edu
Organization name The Scripps Research Institute
Street address 10550 North Torrey Pines Road
City La Jolla
State/province California
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (48)
GSM2357441 R143_S1KO0h
GSM2357442 R143_S1KO12h
GSM2357443 R143_S1KO16h
Relations
BioProject PRJNA349804
SRA SRP091906

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89018_processed_read_counts_RPKM.xlsx 10.8 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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