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Series GSE89137 Query DataSets for GSE89137
Status Public on Oct 26, 2016
Title miRNA expression profiling of alcohol exposure in Drosophila melanogaster
Organism Drosophila melanogaster
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We sequenced microRNA from heads of two D. melanogaster populations: an ethanol treated group (30 minutes after sedation with ethanol saturated vapor), and an age-matched untreated control group; and calculated differential microRNA expression between the two groups.
 
Overall design Examination of microRNA levels in heads of D. melanogaster adult females after ethanol exposure using next generation sequencing (NGS)
 
Contributor(s) Ghezzi A, Pietrzykowski AZ
Citation(s)
  • Ghezzi A, Zomeno M, Pietrzykowski AZ, Atkinson NS. Immediate-early alcohol-responsive miRNA expression in Drosophila. J Neurogenet 2016 Sep-Dec;30(3-4):195-204. PMID: 27845601
Submission date Oct 25, 2016
Last update date Jun 17, 2019
Contact name Alfredo Ghezzi
E-mail(s) alfredo.ghezzi@upr.edu
Organization name University of Puerto Rico, Rio Piedras
Department Department of Biology
Lab Ghezzi Lab
Street address PO box 23360
City San Juan
State/province Puerto Rico
ZIP/Postal code 00931
Country USA
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (2)
GSM2359511 miRNA-control
GSM2359512 miRNA-EtOH_30min
Relations
BioProject PRJNA350386
SRA SRP092032

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89137_Control-VS-ETOH_Fly_Head_known_miR_DiffExp.txt.gz 5.9 Kb (ftp)(http) TXT
GSE89137_Control-VS-ETOH_Fly_Head_novel_miR_DiffExp.txt.gz 1.1 Kb (ftp)(http) TXT
GSE89137_RAW.tar 20.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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