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Series GSE89163 Query DataSets for GSE89163
Status Public on Feb 08, 2017
Title Transcriptome analysis in sheep Milk Somatic Cells
Organism Ovis aries
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the molecular bases of diet induced differences in milk composition, we collected milk from mid lactation dairy ewes and after 3 weeks of diet supplementation with extruded linseed. RNAs were isolated from milk somatic cells isolated from milk of 3 sheep and Illumina RNA sequencing was performed to analyze RNA synthesis in these cells.
 
Overall design Transcriptional profiling of milk somatic cells of sheep fed with normal diet and with a supplementation with extruded linseed. Sequence data were generated by deep sequencing, on three replicates, using Illumina HiSeq2000.
 
Contributor(s) Giordani T, Vangelisti A, Conte G, Mele M, Cavallini A
Citation(s) 27920979
Submission date Oct 25, 2016
Last update date May 15, 2019
Contact name Tommaso Giordani
E-mail(s) tommaso.giordani@unipi.it
Organization name University of Pisa
Department Department of Agricolture, Food and Enviroment
Street address via del Borghetto 80
City Pisa
ZIP/Postal code 56124
Country Italy
 
Platforms (1)
GPL15670 Illumina HiSeq 2000 (Ovis aries)
Samples (6)
GSM2359896 C1
GSM2359897 C2
GSM2359898 C3
Relations
BioProject PRJNA350511
SRA SRP092051

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89163_RPKM_sheep_linseed.txt.gz 1.3 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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