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Series GSE89272 Query DataSets for GSE89272
Status Public on Feb 16, 2017
Title Diverse interventions that extend mouse lifespan suppress shared age-associated epigenetic changes at critical gene regulatory regions (RNA-Seq)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Investigation into changes in the methylome in young (2 months) and aged (22 months) Ames dwarf (Prop1 Hom) and WT (Prop1 Het) mice
 
Overall design We quantify transcription via high throughput RNA sequencing in young (2 months) and old (22 months) mice that show increased longevity through a variety of interventions
 
Contributor(s) Cole JJ, Robertson NA, Rather MI, Adams PD
Citation(s) 28351383
Submission date Oct 28, 2016
Last update date May 15, 2019
Contact name Neil A Robertson
E-mail(s) neil.alistair.robertson@hotmail.co.uk
Organization name University of Glasgow
Department Beatson Institute for Cancer Research
Lab Kristina Kirschner
Street address Switchback Road
City Glasgow
State/province Scotland
ZIP/Postal code G61 1BD
Country United Kingdom
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (16)
GSM2363470 DO Rep1 - Ames Prop1 Hom – 22 month
GSM2363471 DO Rep2 - Ames Prop1 Hom – 22 month
GSM2363472 DO Rep3 - Ames Prop1 Hom – 22 month
This SubSeries is part of SuperSeries:
GSE89275 Diverse interventions that extend mouse lifespan suppress shared age-associated epigenetic changes at critical gene regulatory regions
Relations
BioProject PRJNA351224
SRA SRP092242

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89272_DESeq2.DO-DY.csv.gz 2.0 Mb (ftp)(http) CSV
GSE89272_DESeq2.DO-WTO.csv.gz 2.0 Mb (ftp)(http) CSV
GSE89272_DESeq2.DY-WTY.csv.gz 2.0 Mb (ftp)(http) CSV
GSE89272_DESeq2.WTO-WTY.csv.gz 2.0 Mb (ftp)(http) CSV
GSE89272_FPKM_Matrix.csv.gz 1.8 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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