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Series GSE89319 Query DataSets for GSE89319
Status Public on Oct 28, 2017
Title RNAseq of wild type and Toddler mutant zebrafish embryos
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary Goal of this study is differential gene expression between wild type and Toddler mutant during early zebrafish embryogenesis
 
Overall design Four timepoints - 4 hours post fertilization (hpf), 5 hpf, 6 hpf, and 7 hpf; one replicate of wild type at each time point, one replicate Toddler mutant at each time point
 
Contributor(s) Gagnon JA, Pauli A, Schier AF
Citation(s) 29117894
Submission date Oct 31, 2016
Last update date May 15, 2019
Contact name James A Gagnon
E-mail(s) james.gagnon@gmail.com
Organization name University of Utah
Department Biological Sciences
Street address 1390 Presidents Circle, Crocker Science Center Receiving, Crocker Science Center Receiving
City Salt Lake City
State/province UT
ZIP/Postal code 84112
Country USA
 
Platforms (1)
GPL18413 Illumina HiSeq 2500 (Danio rerio)
Samples (8)
GSM2365926 Wild type 4 hpf
GSM2365927 Toddler mutant 4 hpf
GSM2365928 Wild type 5 hpf
Relations
BioProject PRJNA351784
SRA SRP092317

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89319_4hpf_gene_exp.diff.gz 1.1 Mb (ftp)(http) DIFF
GSE89319_5hpf_gene_exp.diff.gz 1.1 Mb (ftp)(http) DIFF
GSE89319_6hpf_gene_exp.diff.gz 1.1 Mb (ftp)(http) DIFF
GSE89319_7hpf_gene_exp.diff.gz 1.1 Mb (ftp)(http) DIFF
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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