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GEO accession:
Series GSE89744
Query DataSets for GSE89744
Status
Public on Aug 01, 2017
Title
Analyses of a mutant FoxP3 allele reveal BATF as a critical transcription factor in the differentiation and accumulation of tissue regulatory T cells
Organism
Mus musculus
Experiment type
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
28778586
Submission date
Nov 10, 2016
Last update date
May 15, 2019
Contact name
Shohei Hori
E-mail(s)
shohei.hori@riken.jp
Phone
+81-45-503-7069
Organization name
RIKEN Center for Integrative Medical Sciences
Lab
Laboratory for Immune Homeostasis
Street address
1-7-22 Suehiro-cho, Tsurumi-ku
City
Yokohama
State/province
Kanagawa
ZIP/Postal code
230-0045
Country
Japan
Platforms (2)
GPL1261
[Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
GPL18480
Illumina HiSeq 1500 (Mus musculus)
Samples (47)
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GSM2385956
Mock-transduced T cells_1
GSM2385957
Mock-transduced T cells_2
GSM2385958
Mock-transduced T cells_3
GSM2385959
WT FoxP3-transduced T cells_1
GSM2385960
WT FoxP3-transduced T cells_2
GSM2385961
WT FoxP3-transduced T cells_3
GSM2385962
A384T FoxP3-transduced T cells_1
GSM2385963
A384T FoxP3-transduced T cells_2
GSM2385964
A384T FoxP3-transduced T cells_3
GSM2385965
R397W FoxP3-transduced T cells_1
GSM2385966
R397W FoxP3-transduced T cells_2
GSM2386159
Tconv_1
GSM2386160
Tconv_2
GSM2386161
WT Treg (GFP+ from WT:hCD2/WT:GFP mice)_1
GSM2386162
WT Treg (GFP+ from WT:hCD2/WT:GFP mice)_2
GSM2386163
WT Treg (hCD2+ from WT:hCD2/WT:GFP mice)_3
GSM2386164
WT Treg (hCD2+ from WT:hCD2/WT:GFP mice)_4
GSM2386165
WT Treg (GFP+ from A384T:hCD2/WT:GFP mice)_1
GSM2386166
WT Treg (GFP+ from A384T:hCD2/WT:GFP mice)_2
GSM2386167
WT Treg (GFP+ from A384T:hCD2/WT:GFP mice)_3
GSM2386168
A384T Treg_1
GSM2386169
A384T Treg_2
GSM2386170
A384T Treg_3
GSM2386171
I363V Treg_1
GSM2386172
I363V Treg_2
GSM2386173
I363V Treg_3
GSM2386174
R397W Treg_1
GSM2386175
R397W Treg_2
GSM2386176
R397W Treg_3
GSM2386193
Batf+/+ Treg_1
GSM2386194
Batf+/+ Treg_2
GSM2386195
Batf+/+ Treg_3
GSM2386196
Batf-/- Treg_1
GSM2386197
Batf-/- Treg_2
GSM2386198
Batf-/- Treg_3
GSM2387500
WT Treg_1 (ChIP-seq)
GSM2387501
WT Treg_2 (ChIP-seq)
GSM2387502
WT Treg_3 (ChIP-seq)
GSM2387503
A384T Treg_1 (ChIP-seq)
GSM2387504
A384T Treg_2 (ChIP-seq)
GSM2387505
A384T Treg_3 (ChIP-seq)
GSM2387506
WT Treg_1_Input (ChIP-seq)
GSM2387507
WT Treg_2_Input (ChIP-seq)
GSM2387508
WT Treg_3_Input (ChIP-seq)
GSM2387509
A384T Treg_1_Input (ChIP-seq)
GSM2387510
A384T Treg_2_Input (ChIP-seq)
GSM2387511
A384T Treg_3_Input (ChIP-seq)
This SuperSeries is composed of the following SubSeries:
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More...
GSE89645
Expression data from mutant FoxP3-transduced CD4 T cells
GSE89654
Expression data from Treg cells expressing mutant FoxP3
GSE89656
Expression data from BATF-deficient Treg cells
GSE89743
Genome-wide maps of FoxP3 binding in FoxP3WT and FoxP3A384T Treg cells
Relations
BioProject
PRJNA353077
Download family
Format
SOFT formatted family file(s)
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Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE89744_RAW.tar
128.7 Mb
(http)
(custom)
TAR (of CEL, TXT)
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