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Series GSE89884 Query DataSets for GSE89884
Status Public on Jun 12, 2017
Title DLX3 binding sites in Supabasal Keratinocytes
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary DLX3 is a homeodomain transcription factor involved in epidermal differentiation. Here we investigated the distribution of DLX3 DNA binding sites in suprabasal differentiating keratinocytes using ChIP-seq.
 
Overall design Suprabasal keratinocytes were isolated from neonatal mice epidermis by Percoll gradient and used for ChIP-seq analysis using anti-DLX3 and anti-H3K4me3 antibodies.
 
Contributor(s) Kellett M, Bible PW, Gutierrez-Cruz G, Brooks SR, Sun H, Morasso MI
Citation(s) 28186503
Submission date Nov 15, 2016
Last update date May 15, 2019
Contact name Hong-wei Sun
Organization name NIAMS
Department Office of Science & Technology
Lab Biodata Mining & Discovery Section
Street address 9000 Rockville Pile
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (3)
GSM2392490 IgG
GSM2392491 Dlx3
GSM2392492 K4me3
Relations
BioProject PRJNA353645
SRA SRP093384

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89884_RAW.tar 126.5 Mb (http)(custom) TAR (of BED, BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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