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Series GSE90134 Query DataSets for GSE90134
Status Public on Jul 20, 2017
Title Transcriptome analysis of Bcl11b mutant CD4+CD8+ thymocytes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Comparison of transcriptome between wild type, CD4 cre conditional knock-out and Bcl11b mutant mice.
 
Overall design Five replicates from wt newborn thymus, three replicates mutant new born thymus and four replicate of Bcl11bfl/fl: Cd4-Cre mice.
 
Contributor(s) Taniuchi I, Kakugawa K, Endo TA
Citation(s) 28951542
Submission date Nov 22, 2016
Last update date May 15, 2019
Contact name Takaho A. Endo
E-mail(s) takaho.endo@riken.jp
Organization name RIKEN
Department IMS
Lab Laboratory for Integrative Genomics
Street address 1-7-22 Suehiro, Tsurumi
City Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
 
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (12)
GSM2399078 WT1
GSM2399079 HM1
GSM2399080 WT2
Relations
BioProject PRJNA354517
SRA SRP093711

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE90134_fpkm_rnaseq_taniuchi_1.txt.gz 672.8 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Processed data are available on Series record
Raw data are available in SRA

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