|
| Status |
Public on Mar 07, 2019 |
| Title |
Sox2 is required for functional chromatin connectivity in brain-derived neural stem cells. |
| Organism |
Mus musculus |
| Experiment type |
Other
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
30849367 |
| Submission date |
Nov 26, 2016 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Federico Zambelli |
| Organization name |
University of Milan
|
| Department |
Department of Biosciences
|
| Street address |
Via Giovanni Celoria 26
|
| City |
Milano |
| ZIP/Postal code |
20133 |
| Country |
Italy |
| |
|
| Platforms (2) |
| GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (65)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE90557 |
Genome-wide maps of chromatin state in neural stem/progenitor cells (NSC) from mouse neonatal forebrain [ChIA-PET] |
| GSE90558 |
Genome-wide maps of chromatin state in neural stem/progenitor cells (NSC) from mouse neonatal forebrain [ChIP-seq] |
| GSE90559 |
Sox2 is required for global chromatin interactions in brain-derived neural stem cells [ChIP-seq] |
| GSE90560 |
Next Generation Sequencing of polyA+ RNA of cultured neural stem/progenitor cells (NSC) from mouse neonatal forebrain [RNA-seq] |
| GSE111190 |
4Cseq analysis of neural stem/progenitor cells (NSC) from wild type and Sox2-deleted mouse neonatal forebrain |
|
| Relations |
| BioProject |
PRJNA355012 |
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