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Series GSE92346 Query DataSets for GSE92346
Status Public on Jun 20, 2018
Title Expression charcaterization of an internal protocol developed to differentiate RPE cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We performed RNA-seq and miRNA-seq in fetal RPE cells differentated during 5 weeks in a transwell set up
Overall design Samples from days 7, 14, 21, 28 and 35 were characterized. Cells were grown in a proliferation medium during the first week (EpiCM) and then in a maturation medium (MAM medium) that enahnces differentiation towards the desired phenotype.
Contributor(s) Iacone R, Melo E, Eren Ghiani Z, Badi L, Schmucki R, Kam-Thong T, Flint N, Hoflack J
Citation(s) 29269042
Submission date Dec 13, 2016
Last update date May 15, 2019
Contact name Roland Schmucki
Organization name F. Hoffmann - La Roche AG
Street address Grenzacherstrase
City Basel
ZIP/Postal code 4058
Country Switzerland
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (40)
GSM2427904 1_7d RNA-Seq
GSM2427905 2_7d RNA-Seq
GSM2427906 3_7d RNA-Seq
BioProject PRJNA357267
SRA SRP095037

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE92346_gene_counts.gct.gz 1.0 Mb (ftp)(http) GCT
GSE92346_gene_rpkms.gct.gz 1.3 Mb (ftp)(http) GCT
GSE92346_mirna_rpm.gct.gz 65.8 Kb (ftp)(http) GCT
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Raw data are available in SRA
Processed data are available on Series record

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