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Series GSE92348 Query DataSets for GSE92348
Status Public on Feb 24, 2020
Title Gene expression changes in Corynebacterium glutamicum during iron limitation [Set I]
Platform organisms Gluconobacter oxydans; Escherichia coli; Corynebacterium glutamicum; Bacillus subtilis subsp. subtilis str. 168
Sample organism Corynebacterium glutamicum ATCC 13032
Experiment type Expression profiling by array
Summary Iron is the fourth most abundant element in the Earth’s crust. However, the poor solubility of iron due to oxidation of ferrous iron to the almost insoluble ferric iron under aerobic conditions constitutes a considerable challenge for living organisms to obtain sufficient amounts of the iron available. In the present study, we set out to characterize the global gene expression of C. glutamicum under iron limitation in comparison to iron-replete conditions.
 
Overall design C. glutamicum cells were cultured under iron deplete (1 µM) or replete (36 µM) conditions and were harvested at early exponential phase (OD600 4–5).
 
Contributor(s) Küberl A, Mengus-Kaya A, Gätgens J, Polen T, Bott M
Citation(s) 32144105
Submission date Dec 13, 2016
Last update date Apr 14, 2021
Contact name Tino Polen
E-mail(s) t.polen@fz-juelich.de
Organization name Forschungszentrum Jülich GmbH
Department IBG-1: Biotechnology
Street address Leo Brandt Str.
City Juelich
State/province NRW
ZIP/Postal code 52425
Country Germany
 
Platforms (1)
GPL22792 FZ_IBG1_4plex_041487
Samples (3)
GSM2427953 WT_1uM_Fe_vs_36uM_Fe_I
GSM2427954 WT_1uM_Fe_vs_36uM_Fe_II
GSM2427955 WT_36uM_Fe_vs_1uM_Fe_III_CSW
This SubSeries is part of SuperSeries:
GSE92397 Gene expression changes in Corynebacterium glutamicum during iron limitation
Relations
BioProject PRJNA357408

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE92348_RAW.tar 12.2 Mb (http)(custom) TAR (of GPR)
Processed data included within Sample table

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