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Series GSE92620 Query DataSets for GSE92620
Status Public on Aug 15, 2017
Title Klf1 and Klf3 compete for promoters and enhancers to fine-tune transcription
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary Reciprocal gene regulation by Krüppel-like factors
 
Overall design ChIP-seq of KLF3 and KLF1 in erythroid cell lines. 4sU-RNA-seq before and after induction of KLF3-ER in erythroid cell lines.
 
Contributor(s) Ilsley MD, Gillinder KR, Huang S, Perkins AC
Citation(s) 28541545
Submission date Dec 20, 2016
Last update date May 15, 2019
Contact name Melissa D Ilsley
E-mail(s) melissa.ilsley@med.lu.se
Organization name Mater Research
Street address 36 Kent street
City Woolloongabba
State/province Queensland
ZIP/Postal code 4102
Country Australia
 
Platforms (1)
GPL18635 Ion Torrent Proton (Mus musculus)
Samples (10)
GSM2433638 KLF3 ChIP-seq
GSM2433639 KLF3 input DNA
GSM2433640 KLF1 ChIP-seq
Relations
BioProject PRJNA358188
SRA SRP095397

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE92620_Annotated_KLF1_peak_list.csv.gz 184.8 Kb (ftp)(http) CSV
GSE92620_Annotated_KLF3_peak_list.csv.gz 220.3 Kb (ftp)(http) CSV
GSE92620_J2EvsKLF3_RNA-seq.csv.gz 850.7 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Processed data are available on Series record
Raw data are available in SRA

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